Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015793675.1_cds_XP_016435005.1_3011
CDS Infomation

[gene=LOC107761280] [db_xref=GeneID:107761280] [protein=ATP-dependent DNA helicase Q-like SIM isoform X2] [protein_id=XP_016435005.1] [location=complement(join(27719..27762,28194..28345,28423..28522,29421..29484,29751..29831,33819..33875,34294..34520,35590..35938,36560..36749,38981..39091,39175..39394,39489..40065))] [gbkey=CDS]
Sequence

ATGGAGCCAGACCAAGTTGTTGCTGAGTTAGTTGGAATGGGATTTGAGTTATCTGATGTT
ACAAATGCTATAGAAGCTGTGGGTCTGTCGATTGATGGTGCAATTGATTTTCTACTTGAT
GATTCTCGAAGAAACACTGCGAGTGCATCAACTAGTAACACATGCATTACCAGTTGTGCT
GGCACACTGGGAAAAAGAGCCTCCTCTTCGTCGCGTTCTGCAAGTAAAATGCGGCAACCC
AGCATAAACGAATTCATTCAGTCAGCAGGTAGACCTAAAAGAAGCAAGACCATGAATAAG
TTGGATATGTCTCAATTAGAAGTCTTGCAAAGAGATGCCGGAGGTTGTAATATGCATCCT
CCCCCAGAGGATACTGATCTGCACATTGCAGTTGAAAAAGCCGAGTTGCCATATAATCAC
AAAGACGAAGAGAGCATTGGACCAGATTGGGAAAAGCAGGTTAAGAATTTGTTGCACAAG
CACTTTGGATACTCATCCTTAAAGAATTTTCAGAGAGAAGCTCTTGAAACTTGGTTAGCT
CACCAGGACTGTCTTGTTCTTGCAGCAACAGGATCTGGGAAGTCTTTGTGTTTTCAAATT
CCGGCATTGCTGACTGGGAAGGTTGTCATTGTTATATCACCATTGATTAGCTTGATGCAC
GACCAGTGCTTGAAGTTAGCAAAACATGGAGTTTCTGCTTGCTTCCTTGGATCTGGTCAA
ATTGATCGAAGTGTTGAACAAAAAGCAATGGCAGGCATGTATAGCATCATTTATGTATGC
CCCGAGACAATTCTAAGACTCATAAAACCCCTCCAAAGCCTAGCAGAAAGCCGTGGAATT
GCTCTATTTGCAATCGATGAAGTTCATTGTGTTTCTAAGTGGGGTCATGATTTTCGACCA
GATTACAGGCGATTGTCTGTTTTGAGAGAGAACTTTAGAATGGATACCATGAAGTTTCTG
AAATTTGACATACCGATCATGGCATTGACTGCTACTGCAACTACTCGTGTTCGAGAAGAC
ATTCTGCAGTCATTGCACATGTCAAAGGCGACACAAATTGTTCTCACTTCATTTTTCAGG
CCAAATCTCAGATTTTCAGTGAAACACTCTAGGACATCATCTATAGAGTCCTACAAGAAG
GATTTTCATGAACTGATAAGCATTTATTCCAGAAAAGGGAAGACTGGCAGGAAAAGTAAG
TTAATGCCCACAAATCCGGAGGAGAACTCTGACAGCTCTGATAATGCTTCCAATGGTTGC
ATGGATGAATATAATGGAATCTATGAGGTTAATGTAGACGACGTTGTGGGGGATGCCGTT
TCTGAGAGTGAAGACGAAGTACGTTCTCCTGGGCGATGTGGTTTGGCTCCTCTGAAGGAT
AGACAATTGTCTGTTGAGTATCTGGAAGATGAGTGTGATCTTGTGCAAGATGTTGATGAT
TTGGATGTTTCTTGTGGTGAATTTAGCGGAAAACTACCAACAAAAGGTTTTAGTGGTTTT
CTACTGCCCAAAGCACCTGATCTGCCCAGTAAGCCAGAGGAAAGAGCAAAGTTTCAGCAT
GAACCGTTGGAAGATGGACCGACAATAATCTATGTCCCAACTAGGAAAGAAACATTAAGT
ATATCAAAATTTCTTTCTAGATCTGGGATCAAAGCTGCTGCTTACAATGCTAAGTTGCCA
AAATCACATCTAAGGCAGGTGCATAAGGAATTTCACGAGAACACGCTGCAGGTCATTGTC
GCAACAATTGCCTTTGGTATGGGTATTGACAAGTTGAATGTGCGAAGGATCATTCACTAC
GGCTGGCCCCAGAGTCTGGAGGCTTATTATCAAGAGGCTGGTCGAGCTGGTCGGGATGGA
AAAGTAGCGGAGTGTGTTCTATATGCAAACCTGTCAAGAACACCGACGCTTCTACCAAGT
CAAAGAAGTGAAGAGCAGACAAAACAAGCATATAAGATGTTGTCGGATTGCTTCAGATAT
GGAATGAACACTTCTTGCTGTAGAGCTAAAACACTTGTGGAGTACTTCGGCGAGCGCTTT
CTTTTGGAGAAATGTCTTGTGTATGTCAAGACACACTGGCTATTGTGCTTTATCTTTTGT
TCCTTACAAGCTGCTTCACGTCAAGGATGTGTGATATATGCATCAAAGGACCACCTGAAA
GGCAGAATTTAA

Peptide Sequence

PEP ID

XP_016435005.1
PEP Infomation

PREDICTED: ATP-dependent DNA helicase Q-like SIM isoform X2 [Nicotiana tabacum]
Sequence

MEPDQVVAELVGMGFELSDVTNAIEAVGLSIDGAIDFLLDDSRRNTASASTSNTCITSCA
GTLGKRASSSSRSASKMRQPSINEFIQSAGRPKRSKTMNKLDMSQLEVLQRDAGGCNMHP
PPEDTDLHIAVEKAELPYNHKDEESIGPDWEKQVKNLLHKHFGYSSLKNFQREALETWLA
HQDCLVLAATGSGKSLCFQIPALLTGKVVIVISPLISLMHDQCLKLAKHGVSACFLGSGQ
IDRSVEQKAMAGMYSIIYVCPETILRLIKPLQSLAESRGIALFAIDEVHCVSKWGHDFRP
DYRRLSVLRENFRMDTMKFLKFDIPIMALTATATTRVREDILQSLHMSKATQIVLTSFFR
PNLRFSVKHSRTSSIESYKKDFHELISIYSRKGKTGRKSKLMPTNPEENSDSSDNASNGC
MDEYNGIYEVNVDDVVGDAVSESEDEVRSPGRCGLAPLKDRQLSVEYLEDECDLVQDVDD
LDVSCGEFSGKLPTKGFSGFLLPKAPDLPSKPEERAKFQHEPLEDGPTIIYVPTRKETLS
ISKFLSRSGIKAAAYNAKLPKSHLRQVHKEFHENTLQVIVATIAFGMGIDKLNVRRIIHY
GWPQSLEAYYQEAGRAGRDGKVAECVLYANLSRTPTLLPSQRSEEQTKQAYKMLSDCFRY
GMNTSCCRAKTLVEYFGERFLLEKCLVYVKTHWLLCFIFCSLQAASRQGCVIYASKDHLK
GRI

Transcript Sequence

Gene sequence data has not been registered.